PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AT2G37430.1
Common NameF3G5.22, ZAT11
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family C2H2
Protein Properties Length: 178aa    MW: 20230.4 Da    PI: 10.1201
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AT2G37430.1genomeTAIRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.000294769123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ C+k+Fs+   L  H  +H
  AT2G37430.1 47 FECKTCNKRFSSFQALGGHRASH 69
                 89**********99999998887 PP

2zf-C2H2157.4e-0594116123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  +kC++C++sF +   L  H+r+H
  AT2G37430.1  94 HKCSICSQSFGTGQALGGHMRRH 116
                  79********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.4E-43571IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.58E-746116No hitNo description
PROSITE profilePS5015710.5334774IPR007087Zinc finger, C2H2
SMARTSM003550.0934769IPR015880Zinc finger, C2H2-like
PfamPF139122.9E-124771IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
SMARTSM003550.01494116IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.82794121IPR007087Zinc finger, C2H2
PfamPF139123.9E-1194118IPR007087Zinc finger, C2H2
PROSITE patternPS00028096116IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0071289Biological Processcellular response to nickel ion
GO:2000280Biological Processregulation of root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Plant Ontology ? help Back to Top
PO Term PO Category PO Description
PO:0000293anatomyguard cell
PO:0009005anatomyroot
PO:0020030anatomycotyledon
PO:0020038anatomypetiole
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MKRERSDFEE SLKNIDIAKC LMILAQTSMV KQIGLNQHTE SHTSNQFECK TCNKRFSSFQ  60
ALGGHRASHK KPKLTVEQKD VKHLSNDYKG NHFHKCSICS QSFGTGQALG GHMRRHRSSM  120
TVEPSFISPM IPSMPVLKRC GSSKRILSLD LNLTPLENDL EYIFGKTFVP KIDMKFVL
Expression -- Microarray ? help Back to Top
Source ID E-value
Genevisible266010_at0.0
Expression AtlasAT2G37430-
AtGenExpressAT2G37430-
ATTED-IIAT2G37430-
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in leaves. {ECO:0000269|PubMed:9132053}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Function -- GeneRIF ? help Back to Top
  1. ZAT11 is a dual function transcriptional regulator that positively regulates primary root growth but negatively regulates nickel tolerance.
    [PMID: 25163803]
Cis-element ? help Back to Top
SourceLink
PlantRegMapAT2G37430.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Phenotype -- Mutation ? help Back to Top
Source ID
T-DNA ExpressAT2G37430
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0058960.0AC005896.3 Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence.
GenBankCP0026850.0CP002685.1 Arabidopsis thaliana chromosome 2, complete sequence.
GenBankX986720.0X98672.1 A.thaliana mRNA for ZAT11 protein.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_181279.11e-131zinc finger protein ZAT11
SwissprotQ9SLD41e-133ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLD7LJS81e-120D7LJS8_ARALL; Zinc finger family protein
STRINGAT2G37430.11e-131(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM53128150
Representative plantOGRP13115149
Publications ? help Back to Top
  1. Riechmann JL, et al.
    Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, 2000. 290(5499): p. 2105-10
    [PMID:11118137]
  2. Goda H, et al.
    Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis.
    Plant Physiol., 2004. 134(4): p. 1555-73
    [PMID:15047898]
  3. Guan Y,Nothnagel EA
    Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures.
    Plant Physiol., 2004. 135(3): p. 1346-66
    [PMID:15235117]
  4. Englbrecht CC,Schoof H,B
    Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome.
    BMC Genomics, 2004. 5(1): p. 39
    [PMID:15236668]
  5. Gechev TS,Minkov IN,Hille J
    Hydrogen peroxide-induced cell death in Arabidopsis: transcriptional and mutant analysis reveals a role of an oxoglutarate-dependent dioxygenase gene in the cell death process.
    IUBMB Life, 2005. 57(3): p. 181-8
    [PMID:16036580]
  6. Taki N, et al.
    12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis.
    Plant Physiol., 2005. 139(3): p. 1268-83
    [PMID:16258017]
  7. Thilmony R,Underwood W,He SY
    Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7.
    Plant J., 2006. 46(1): p. 34-53
    [PMID:16553894]
  8. Mittler R, et al.
    Gain- and loss-of-function mutations in Zat10 enhance the tolerance of plants to abiotic stress.
    FEBS Lett., 2006. 580(28-29): p. 6537-42
    [PMID:17112521]
  9. Lee J, et al.
    Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development.
    Plant Cell, 2007. 19(3): p. 731-49
    [PMID:17337630]
  10. Libault M,Wan J,Czechowski T,Udvardi M,Stacey G
    Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.
    Mol. Plant Microbe Interact., 2007. 20(8): p. 900-11
    [PMID:17722694]
  11. Gandia-Herrero F, et al.
    Detoxification of the explosive 2,4,6-trinitrotoluene in Arabidopsis: discovery of bifunctional O- and C-glucosyltransferases.
    Plant J., 2008. 56(6): p. 963-74
    [PMID:18702669]
  12. Liu XM, et al.
    ZAT11, a zinc finger transcription factor, is a negative regulator of nickel ion tolerance in Arabidopsis.
    Plant Cell Rep., 2014. 33(12): p. 2015-21
    [PMID:25163803]
  13. Meissner R,Michael AJ
    Isolation and characterisation of a diverse family of Arabidopsis two and three-fingered C2H2 zinc finger protein genes and cDNAs.
    Plant Mol. Biol., 1997. 33(4): p. 615-24
    [PMID:9132053]